Palier 1 • Identité NCBI
🦠 NCBI TAXID #1030007 • STRAIN • Bacteria
🔎 NCBI Certificate #1030007
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Salmonella enterica subsp. enterica serovar Heidelberg str. 670102-5 "Bacillus cholerae-suis" Smith 1894
🌍 Salmonellosis foodborne pathogen ; Agent pathogène de la salmonellose
⚡ 3 active Index-Experts™ pole(s) (O(1) routing) • 🧀 0 linked cheese matrix/matrices • 🧊 25 3D structure(s) RCSB PDB / EBI SIFTS
🌳 Phylogenetic Lineage & Associated Cheese Matrices
Palier 2 • Fromager & Sommelier
Pseudomonadota (phylum)
› Gammaproteobacteria (class)
› Enterobacterales (order)
› Enterobacteriaceae (family)
› Salmonella (genus)
🧫 Isolation Substrates, Biological Hosts & Cellar Ecology (NCBI Host)
Palier 3 • Praticien & Affineur
Fromages au lait cru à pâte molle ou pressée non cuite (Morbier, Saint-Nectaire, Reblochon, Cantal), fromages de chèvre
INDEX-EXPERT™ #01 • Tyrodexia™ Architecture
Palier 5
Synonyms and historical names (NCBI)
🔎 SQLite Proof
| Nomenclature concordance (NCBI) | Salmonella enterica subsp. enterica serovar Heidelberg str. 670102-5 ⟷ Salmonella enterica subsp. enterica serovar Heidelberg strain 670102-5 |
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| Historical synonyms & basionyms | Salmonellosis foodborne pathogen ; Agent pathogène de la salmonellose • Bacteria |
| Taxonomic authority & reference strains | "Bacillus cholerae-suis" Smith 1894 |
| Official sources & reference book | TaxID:1030007 • Le grand dictionnaire du microbiome des fromages (https://www.tyrodexia.com/index.html#ouvrage) |
| Lineage & phylogenomic justification | Pseudomonadota (phylum) › Gammaproteobacteria (class) › Enterobacterales (order) › Enterobacteriaceae (family) › Salmonella (genus) |
| PubMed taxonomic references | PMID:29605355 🔎 • DOI:10.1016/j.ijfoodmicro.2018.03.011 🔎 |
INDEX-EXPERT™ #06 • Tyrodexia™ Architecture
Palier 3
Symptoms and manufacturing defects
🔎 SQLite Proof
| Vigilance category & defect diagnosis | Agent pathogène de la salmonellose • Aucune altération organoleptique détectable du fromage ; toxi-infection alimentaire collective sévère (critère réglementaire : absence dans 25 g) |
|---|---|
| Spoilage metabolites & taxonomic lineage | Adaptation acide (réponse ATR) en cas de descente lente du pH en cuve permettant la survie tout au long de l'affinage |
| Documented substrates & historical synonyms | Surveillance sanitaire des troupeaux et des filtres à lait, acidification lactique rapide et précoce en cuve, libération libératoire par PCR • Acidification insuffisante ou lente en cuve, survie prolongée à bas aw et dans la matière grasse fromagère, portage asymptomatique en élevage |
| Official sources & reference book | TaxID:1030007 • Le manuel clinique des pathologies laitières et fromagères (https://www.tyrodexia.com/index.html#collection) |
| Reference strain collections | DSM 17058, ATCC 13311 (Typhimurium), NCTC 12416, CIP 60.62 |
| Operator safety & PubMed references | PMID:29605355 🔎 • DOI:10.1016/j.ijfoodmicro.2018.03.011 🔎 |
INDEX-EXPERT™ #08 • Tyrodexia™ Architecture
Palier 4
Pathogens and bioprotection
🔎 SQLite Proof
| Bacteriocins (NPClassifier) & health targets | Salmonellosis foodborne pathogen ; Agent pathogène de la salmonellose • Bacteria |
|---|---|
| Isolation substrates & linked cheese matrices | Fromages au lait cru à pâte molle ou pressée non cuite (Morbier, Saint-Nectaire, Reblochon, Cantal), fromages de chèvre • Pseudomonadota (phylum) › Gammaproteobacteria (class) › Enterobacterales (order) › Enterobacteriaceae (family) › Salmonella (genus) |
| Physicochemical barriers (TDM, moisture, NaCl USDA) | "Bacillus cholerae-suis" Smith 1894 • Salmonella enterica subsp. enterica serovar Heidelberg strain 670102-5 |
| Official sources & reference book | TaxID:1030007 • Le manuel clinique des pathologies laitières et fromagères (https://www.tyrodexia.com/index.html#collection) |
| Prophylaxis & PubMed references | PMID:29605355 🔎 • DOI:10.1016/j.ijfoodmicro.2018.03.011 🔎 |
🏛️ Global Culture Collections (DSM / ATCC / CBS), NCBI Synonyms, Strains & FAO DAD-IS Breeds
Palier 4 • Institutionnel & Microbiologiste| NCBI Synonyms & Basionyms | Salmonella enterica subsp. enterica serovar Heidelberg strain 670102-5 |
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🧬 RefSeq Genomics, 3D Structural Biology (EBI SIFTS), Metagenomics (cFMD/FMBN) & PubMed
Palier 5 • Expert Absolu| EBI SIFTS / RCSB PDB 3D Structures | PDB #10LI (25 crystallographic structures • CIF) — RCSB PDB 3D ↗ |
|---|---|
| NCBI RefSeq Genomic Assembly | RefSeq: GCA_000962115.1 • Taille: 4.76147 Mb • GC: 52.1 % • Statut: Contig • BioSample: SAMN01087980 • BioProject: PRJNA66711 |
| PubMed / DOI Primary Literature | PMID:29605355 🔎 • DOI:10.1016/j.ijfoodmicro.2018.03.011 🔎 |