Palier 1 • Identité NCBI
🦠 NCBI TAXID #2056231 • SPECIES • Bacteria
🔎 NCBI Certificate #2056231
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Pseudomonas qingdaonensis "Pseudomonas qingdaonensis" Wang et al. 2019
⚡ 5 active Index-Experts™ pole(s) (O(1) routing) • 🧀 1 linked cheese matrix/matrices
🌳 Phylogenetic Lineage & Associated Cheese Matrices
Palier 2 • Fromager & Sommelier
Pseudomonadota (phylum)
› Gammaproteobacteria (class)
› Pseudomonadales (order)
› Pseudomonadaceae (family)
› Pseudomonas (genus)
🧀 Linked cheeses, dairy matrices and designations (1) :
🧫 Isolation Substrates, Biological Hosts & Cellar Ecology (NCBI Host)
Palier 3 • Praticien & Affineur
Cheese metagenome (en:cheeses ; en:mozzarella — 6 échantillons)
INDEX-EXPERT™ #00 • Tyrodexia™ Cheese Core
Palier 1
Master index of cheese starters and ripening cultures
🔎 SQLite Proof
| Associated dairy & cheese matrices | Mozzarella [en:mozzarella] • Cheese metagenome (en:cheeses ; en:mozzarella — 6 échantillons) |
|---|---|
| Paste typology & technological evidence | Microbiote fromager caractérisé (2 éch.) • Bacteria • Pseudomonadota (phylum) › Gammaproteobacteria (class) › Pseudomonadales (order) › Pseudomonadaceae (family) › Pseudomonas (genus) |
| Official sources & reference book | TaxID:2056231 • SegataLab/cFMD (Cell 2024) (6 échantillons fromagers positifs) • Le grand dictionnaire du microbiome des fromages (https://www.tyrodexia.com/index.html#ouvrage) |
| Matrix TDM % & FDM % | "Pseudomonas qingdaonensis" Wang et al. 2019 |
| Predatory bacteriophages & PubMed literature | DOI:10.1016/j.cell.2024.07.039 🔎 (cFMD) • FoodMicrobionet |
INDEX-EXPERT™ #01 • Tyrodexia™ Architecture
Palier 5
Synonyms and historical names (NCBI)
🔎 SQLite Proof
| Nomenclature concordance (NCBI) | Pseudomonas qingdaonensis ("Pseudomonas qingdaonensis" Wang et al. 2019) |
|---|---|
| Historical synonyms & basionyms | Bacteria |
| Taxonomic authority & reference strains | "Pseudomonas qingdaonensis" Wang et al. 2019 |
| Official sources & reference book | TaxID:2056231 • Le grand dictionnaire du microbiome des fromages (https://www.tyrodexia.com/index.html#ouvrage) |
| Lineage & phylogenomic justification | Pseudomonadota (phylum) › Gammaproteobacteria (class) › Pseudomonadales (order) › Pseudomonadaceae (family) › Pseudomonas (genus) |
| PubMed taxonomic references | DOI:10.1016/j.cell.2024.07.039 🔎 (cFMD) • FoodMicrobionet |
INDEX-EXPERT™ #02 • Tyrodexia™ Architecture
Palier 2
Ecological origins and habitats
🔎 SQLite Proof
| Cheese biotope, terroirs & isolation substrates | Mozzarella [en:mozzarella] • Italie — Campanie — Molise • Cheese metagenome (en:cheeses ; en:mozzarella — 6 échantillons) |
|---|---|
| Deposited strains & reference collections | Microbiote fromager caractérisé (2 éch.) |
| Colonized matrix TDM % & FDM % | Mozzarella (EST 50.0 %, G/S 44.2 %) • Bacteria |
| Official sources & reference book | TaxID:2056231 • Le grand dictionnaire du microbiome des fromages (https://www.tyrodexia.com/index.html#ouvrage) |
| Documented isolation substrate (NCBI Host) | Cheese metagenome (en:cheeses ; en:mozzarella — 6 échantillons) |
| Ecology & PubMed references | DOI:10.1016/j.cell.2024.07.039 🔎 (cFMD) • FoodMicrobionet |
INDEX-EXPERT™ #04 • Tyrodexia™ Architecture
Palier 1
Cheese families and technologies
🔎 SQLite Proof
| Technological family & associated appellations | Fromages italiens ; Fromages à pâte filée • Mozzarella [en:mozzarella] • Cheese metagenome (en:cheeses ; en:mozzarella — 6 échantillons) |
|---|---|
| Paste/rind diagram & technological function | Microbiote fromager caractérisé (2 éch.) • Pseudomonadota (phylum) › Gammaproteobacteria (class) › Pseudomonadales (order) › Pseudomonadaceae (family) › Pseudomonas (genus) |
| Documented cheesemakers, substrates & collections | Cheese metagenome (en:cheeses ; en:mozzarella — 6 échantillons) |
| Official sources & reference book | TaxID:2056231 • Le grand dictionnaire du microbiome des fromages (https://www.tyrodexia.com/index.html#ouvrage) |
| Total dry matter (TDM %) & Fat in dry matter (FDM %) | Mozzarella (EST 50.0 %, G/S 44.2 %) • Bacteria |
| Flagship cheeses (PDO / Caseus) & PubMed studies | Mozzarella (Spécialité traditionnelle garantie) • DOI:10.1016/j.cell.2024.07.039 🔎 (cFMD) • FoodMicrobionet |
INDEX-EXPERT™ #08 • Tyrodexia™ Architecture
Palier 4
Pathogens and bioprotection
🔎 SQLite Proof
| Bacteriocins (NPClassifier) & health targets | Microbiote fromager caractérisé (2 éch.) • Bacteria |
|---|---|
| Isolation substrates & linked cheese matrices | Cheese metagenome (en:cheeses ; en:mozzarella — 6 échantillons) • Mozzarella [en:mozzarella] • Pseudomonadota (phylum) › Gammaproteobacteria (class) › Pseudomonadales (order) › Pseudomonadaceae (family) › Pseudomonas (genus) |
| Physicochemical barriers (TDM, moisture, NaCl USDA) | Mozzarella (EST 50.0 %, MNA 64.18 %, NaCl 1.23 g/100g) • "Pseudomonas qingdaonensis" Wang et al. 2019 |
| Official sources & reference book | TaxID:2056231 • Le manuel clinique des pathologies laitières et fromagères (https://www.tyrodexia.com/index.html#collection) |
| Prophylaxis & PubMed references | DOI:10.1016/j.cell.2024.07.039 🔎 (cFMD) • FoodMicrobionet |
🧬 RefSeq Genomics, 3D Structural Biology (EBI SIFTS), Metagenomics (cFMD/FMBN) & PubMed
Palier 5 • Expert Absolu| NCBI RefSeq Genomic Assembly | RefSeq: GCA_018398475.1 • Taille: 5.93899 Mb • GC: 63.8 % • Statut: Complete Genome |
|---|---|
| PubMed / DOI Primary Literature | DOI:10.1016/j.cell.2024.07.039 🔎 (cFMD) • FoodMicrobionet |
📊 Quantitative Metagenomic Detections (SegataLab/cFMD Cell 2024 & FoodMicrobionet) :